TY - JOUR KW - Cell Culture Techniques KW - Cell Differentiation KW - Cell Line KW - Electrophysiology KW - Female KW - Gene Expression Regulation, Developmental KW - Genetic Predisposition to Disease KW - Humans KW - In Situ Hybridization KW - induced pluripotent stem cells KW - Microscopy, Electron KW - Multigene Family KW - Naphthoquinones KW - organoids KW - Retina KW - Single-Cell Analysis KW - Synapses KW - Transcriptome KW - eye disease KW - human retina KW - macular degeneration KW - organoid KW - organoid development KW - Retina KW - retinal organoid KW - single cell sequencing KW - synaptic function KW - Transcriptome AU - Cameron S. Cowan AU - Magdalena Renner AU - Martina De Gennaro AU - Brigitte Gross-Scherf AU - David Goldblum AU - Yanyan Hou AU - Martin Munz AU - Tiago M. Rodrigues AU - Jacek Krol AU - Tamas Szikra AU - Rachel Cuttat AU - Annick Waldt AU - Panagiotis Papasaikas AU - Roland Diggelmann AU - Claudia P. Patino-Alvarez AU - Patricia Galliker AU - Stefan E. Spirig AU - Dinko Pavlinic AU - Nadine Gerber-Hollbach AU - Sven Schuierer AU - Aldin Srdanovic AU - Marton Balogh AU - Riccardo Panero AU - Akos Kusnyerik AU - Arnold Szabo AU - Michael B. Stadler AU - Selim Orgül AU - Simone Picelli AU - Pascal W. Hasler AU - Andreas Hierlemann AU - Hendrik P. N. Scholl AU - Guglielmo Roma AU - Florian Nigsch AU - Botond Roska AB - Human organoids recapitulating the cell-type diversity and function of their target organ are valuable for basic and translational research. We developed light-sensitive human retinal organoids with multiple nuclear and synaptic layers and functional synapses. We sequenced the RNA of 285,441 single cells from these organoids at seven developmental time points and from the periphery, fovea, pigment epithelium and choroid of light-responsive adult human retinas, and performed histochemistry. Cell types in organoids matured in vitro to a stable "developed" state at a rate similar to human retina development in vivo. Transcriptomes of organoid cell types converged toward the transcriptomes of adult peripheral retinal cell types. Expression of disease-associated genes was cell-type-specific in adult retina, and cell-type specificity was retained in organoids. We implicate unexpected cell types in diseases such as macular degeneration. This resource identifies cellular targets for studying disease mechanisms in organoids and for targeted repair in human retinas. BT - Cell DA - 2020-09-17 DO - 10.1016/j.cell.2020.08.013 IS - 6 LA - eng N2 - Human organoids recapitulating the cell-type diversity and function of their target organ are valuable for basic and translational research. We developed light-sensitive human retinal organoids with multiple nuclear and synaptic layers and functional synapses. We sequenced the RNA of 285,441 single cells from these organoids at seven developmental time points and from the periphery, fovea, pigment epithelium and choroid of light-responsive adult human retinas, and performed histochemistry. Cell types in organoids matured in vitro to a stable "developed" state at a rate similar to human retina development in vivo. Transcriptomes of organoid cell types converged toward the transcriptomes of adult peripheral retinal cell types. Expression of disease-associated genes was cell-type-specific in adult retina, and cell-type specificity was retained in organoids. We implicate unexpected cell types in diseases such as macular degeneration. This resource identifies cellular targets for studying disease mechanisms in organoids and for targeted repair in human retinas. PY - 2020 SP - 1623 EP - 1640.e34 T2 - Cell TI - Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution VL - 182 SN - 1097-4172 ER -