TY - JOUR KW - Acute Kidney Injury KW - Adult KW - Aged KW - Angiotensin-Converting Enzyme 2 KW - Animals KW - Apoptosis KW - Bowman Capsule KW - COVID-19 KW - Chlorocebus aethiops KW - Female KW - Gene Knockout Techniques KW - Genetic diseases KW - Hospital Mortality KW - Hospitalization KW - Humans KW - kidney KW - Kidney Tubules, Proximal KW - Male KW - Middle Aged KW - Molecular pathology KW - Nephrology KW - organoids KW - Podocytes KW - Polycystic Kidney Diseases KW - Protein Kinase D2 KW - Proteome KW - Receptors, Coronavirus KW - Reproducibility of Results KW - SARS-CoV-2 KW - Transcriptome KW - Vero Cells KW - Viral Tropism KW - Virus Replication KW - iPS cells AU - Louisa Helms AU - Silvia Marchiano AU - Ian B. Stanaway AU - Tien-Ying Hsiang AU - Benjamin A. Juliar AU - Shally Saini AU - Yan Ting Zhao AU - Akshita Khanna AU - Rajasree Menon AU - Fadhl Alakwaa AU - Carmen Mikacenic AU - Eric D. Morrell AU - Mark M. Wurfel AU - Matthias Kretzler AU - Jennifer L. Harder AU - Charles E. Murry AU - Jonathan Himmelfarb AU - Hannele Ruohola-Baker AU - Pavan K. Bhatraju AU - Michael Gale AU - Benjamin S. Freedman AB - Kidneys are critical target organs of COVID-19, but susceptibility and responses to infection remain poorly understood. Here, we combine SARS-CoV-2 variants with genome-edited kidney organoids and clinical data to investigate tropism, mechanism, and therapeutics. SARS-CoV-2 specifically infects organoid proximal tubules among diverse cell types. Infections produce replicating virus, apoptosis, and disrupted cell morphology, features of which are revealed in the context of polycystic kidney disease. Cross-validation of gene expression patterns in organoids reflects proteomic signatures of COVID-19 in the urine of critically ill patients indicating interferon pathway upregulation. SARS-CoV-2 viral variants alpha, beta, gamma, kappa, and delta exhibit comparable levels of infection in organoids. Infection is ameliorated in ACE2-/- organoids and blocked via treatment with de novo-designed spike binder peptides. Collectively, these studies clarify the impact of kidney infection in COVID-19 as reflected in organoids and clinical populations, enabling assessment of viral fitness and emerging therapies. BT - JCI insight DA - 2021-12-22 DO - 10.1172/jci.insight.154882 IS - 24 LA - eng N2 - Kidneys are critical target organs of COVID-19, but susceptibility and responses to infection remain poorly understood. Here, we combine SARS-CoV-2 variants with genome-edited kidney organoids and clinical data to investigate tropism, mechanism, and therapeutics. SARS-CoV-2 specifically infects organoid proximal tubules among diverse cell types. Infections produce replicating virus, apoptosis, and disrupted cell morphology, features of which are revealed in the context of polycystic kidney disease. Cross-validation of gene expression patterns in organoids reflects proteomic signatures of COVID-19 in the urine of critically ill patients indicating interferon pathway upregulation. SARS-CoV-2 viral variants alpha, beta, gamma, kappa, and delta exhibit comparable levels of infection in organoids. Infection is ameliorated in ACE2-/- organoids and blocked via treatment with de novo-designed spike binder peptides. Collectively, these studies clarify the impact of kidney infection in COVID-19 as reflected in organoids and clinical populations, enabling assessment of viral fitness and emerging therapies. PY - 2021 EP - e154882 T2 - JCI insight TI - Cross-validation of SARS-CoV-2 responses in kidney organoids and clinical populations VL - 6 SN - 2379-3708 ER -